PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu013907.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 215aa    MW: 24299.1 Da    PI: 9.8689
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu013907.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-102976355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 + h + Er+RR+++ + f +L +++P +     kKl+Ka+ L  A++++++Lq
  Oeu013907.1 29 QDHVMSERKRREKLSQLFINLSKVVPGL-----KKLDKASLLGDAIKHVQELQ 76
                 67999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MKEPLGKKQY EMGAKKVPCS VIRSPLQAQD HVMSERKRRE KLSQLFINLS KVVPGLKKLD  60
KASLLGDAIK HVQELQERVR ILEEEAEEAN RNLIITSNAN YSATRNSIPT LNSFSSKESS  120
INSGTRESVP AEIKARISNN NVMIKIFHKK HKGLVSRIQY EMENLHLNVL DVRAMPFGSS  180
TVDITILAEM KREFCVTVED IVEHLEMAFL NRQA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13540ERKRRE
23641RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.16e-34bHLH family protein