PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu014029.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 259aa    MW: 27476.7 Da    PI: 5.8602
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu014029.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP82.11.4e-251802489
          TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.............k 89
                 +++ caar+F+L++eLG+++ ++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++             +
  Oeu014029.1  1 MPVICAARVFQLTRELGHKSEGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISVKSSGSTISAPlrnsffnqnypvsS 80
                 9**********************************************999655555555553333344444444433331 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MPVICAARVF QLTRELGHKS EGETIEWLLQ QAEPAVIAAT GTGTIPANFT SLNISVKSSG  60
STISAPLRNS FFNQNYPVSS QLRTTEESQR KFLFPEIGLS SENETTTVEG ETSMGRRRRP  120
EEDLQPLLQT QMGSHNYMLQ SSTSSILASQ GQNIPATAFL MVTNSNSQMM SSSTGNSLWP  180
LGSSMHSGGL HFMNFPPPMA LLPGQQLGGT AGGGGGGAMV DGHFGMLDAL NAFRAIPSSS  240
APSSDAQSSD PDHPNHRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35560.13e-35TCP family protein