PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu014193.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 238aa    MW: 26635.2 Da    PI: 6.7906
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu014193.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.52.7e-26959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+i+n + rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tgkl+ yss
  Oeu014193.3  9 KKIDNLTARQVTFSKRRRGVFKKAQELSTLCDAEIALIVFSATGKLFHYSS 59
                 68***********************************************96 PP
2K-box33.81.4e-121351903388
        K-box  33 reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 
                  re+R+l+GedL++L++ eL +Le+ +  +l+++ + K+  l+e+  +l++  ++ +
  Oeu014193.3 135 RELRQLKGEDLHELDMDELIRLEKTVMGGLNHVVEAKESELMEENAKLKQLAEKFE 190
                  899********************************************999887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MVRQKIQIKK IDNLTARQVT FSKRRRGVFK KAQELSTLCD AEIALIVFSA TGKLFHYSSS  60
SKNDYRDCPF EQLTSEGGGA GGGCRTEGSM IIMMQLIERH RGQAENSDKL GQPSFQLLEN  120
NGYGMLSKVL MDKTRELRQL KGEDLHELDM DELIRLEKTV MGGLNHVVEA KESELMEENA  180
KLKQLAEKFE VTGNGTEQSN SSECITNISH GSDTSLRLGY LTFHLRKMRP GDSNPEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-52MIKC_MADS family protein