PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014313.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 268aa MW: 29646.5 Da PI: 8.0871

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014313.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.6	4.9e-19	118	172	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F++n++++ ++++eLA++l+L rqV vWFqNrRa+ k Oeu014313.1 118 RKKLRLTKAQSALLEENFKQNSTLNPKQKQELARELHLRPRQVEVWFQNRRARTK 172 678899***********************************************98 PP
2	HD-ZIP_I/II	118.3	4.2e-38	118	207	1	90
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl+k q++lLEe+F+++++L+p++K+elareL+l+prqv+vWFqnrRARtk+kq+E+d+e Lk+++++lkeen++L+ke +eL+++ Oeu014313.1 118 RKKLRLTKAQSALLEENFKQNSTLNPKQKQELARELHLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLKEENRNLHKELQELKAQ 207 69*************************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MGFNEICNTG LVLGLGLSST DENHKSKIPT LKFNCLGKTS EPSLALSLCG DPGYDRTVKK 60 AVDITDQTGD LYRQDSTVSS LSNLSVKRER EFGSEEGEIE RVCSRVSDED DDGGYNGRKK 120 LRLTKAQSAL LEENFKQNST LNPKQKQELA RELHLRPRQV EVWFQNRRAR TKLKQTEVDC 180 ELLKKCCETL KEENRNLHKE LQELKAQKLA QPFYMAATLS MCPSCERIGG GGGTGAAGSE 240 IPAKSPFSMA PRSHFFNPFA NPPPATC*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	175	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	2e-67	HD-ZIP family protein