PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014496.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 450aa MW: 52064.1 Da PI: 6.2676

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014496.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	72.4	8e-23	122	220	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v++Li+a++++ e+ ++ kk++W++vsk+m+er +sp+qC++k+++lnkryk+++e+ +++ ++e++++ ++d + Oeu014496.1 122 KWTDSMVRLLITAVSYISEEAATEYgcsggrrkfanlHKKGKWKSVSKVMAERSHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVENPTLLDMM 219 7************99999998533366777788889*******************************************669999999999999 PP trihelix 86 e 86 + Oeu014496.1 220 D 220 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MMEGDLSPGN MLQGNGSYGG FNLQGPVRVH QQQQHPLALH QQHSSHPRQG SLMARPTSHE 60 NFLLTIGNTQ DCEQTISFAD YNKGERVKPA SDEDEPSLTE DATDGRNDPI GGKRASRWQR 120 VKWTDSMVRL LITAVSYISE EAATEYGCSG GRRKFANLHK KGKWKSVSKV MAERSHFVSP 180 QQCEDKFNDL NKRYKRLNEI LGRGTSCEVV ENPTLLDMMD HISEKAKEEV RKILSSKHLH 240 YEEMCSYHNG NRLHLPPDPD LQRSLRLALR SGDDHDENDV KRHLQDDNDE VDQEAELDGH 300 DEYEDNHVLN GDRRVQEIPG NSMKRLKQCQ NHEEFSFGSS FNSLDCNKTF NFQPDITDAD 360 VSQVLPESMK ANMSQKQWLS HRSLQLEEQR LHIEAQMLEL EKERFKWQRF CKKKDRELEM 420 TKMEIERMKL ENERMSLELR RREMGIDNS*

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MMEGDLSPGN MLQGNGSYGG FNLQGPVRVH QQQQHPLALH QQHSSHPRQG SLMARPTSHE  60
NFLLTIGNTQ DCEQTISFAD YNKGERVKPA SDEDEPSLTE DATDGRNDPI GGKRASRWQR  120
VKWTDSMVRL LITAVSYISE EAATEYGCSG GRRKFANLHK KGKWKSVSKV MAERSHFVSP  180
QQCEDKFNDL NKRYKRLNEI LGRGTSCEVV ENPTLLDMMD HISEKAKEEV RKILSSKHLH  240
YEEMCSYHNG NRLHLPPDPD LQRSLRLALR SGDDHDENDV KRHLQDDNDE VDQEAELDGH  300
DEYEDNHVLN GDRRVQEIPG NSMKRLKQCQ NHEEFSFGSS FNSLDCNKTF NFQPDITDAD  360
VSQVLPESMK ANMSQKQWLS HRSLQLEEQR LHIEAQMLEL EKERFKWQRF CKKKDRELEM  420
TKMEIERMKL ENERMSLELR RREMGIDNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-135	Trihelix family protein