PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014569.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 326aa MW: 36391.7 Da PI: 7.5619

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014569.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.2	5.9e-18	160	211	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k Oeu014569.1 160 LRLSKEQSAYLEENFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 211 5789**********************************************98 PP
2	HD-ZIP_I/II	126.6	1.1e-40	158	245	2	90
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 kk+rlskeq++ LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr +d+l+een+rL+ke +eLr + Oeu014569.1 158 KKLRLSKEQSAYLEENFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRICDSLTEENRRLHKELQELR-A 245 9*************************************************************************************9.4 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MELGLSLGDS SKDSKEFKFS TKNSNSEHHG TAMTNKQDGL VFCMALGLNS TFGNQESLEN 60 YNQDDDQTLQ GSDDHQEKSM GTPVQLDLLP LAPVPRHTGS PLRGRSENSS LRQRGLLQSV 120 VASGSAEEEV LSANDVMEAE RTSSRASDED ENSHKSGKKL RLSKEQSAYL EENFKEHSTL 180 NPKQKLALAK QLNLRPRQVE VWFQNRRART KLKQTEVDCE YLKRICDSLT EENRRLHKEL 240 QELRALNSSN PFCMQLPATT LTMCPSCERV AAAASTLTTT PATNPPISKT STIESTPKVI 300 PFPLFRPRFY PFFRSPSHYH QSASS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	214	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	1e-59	HD-ZIP family protein