PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014617.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 544aa MW: 59923.6 Da PI: 5.629

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014617.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.7	2.6e-18	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l Oeu014617.2 37 KGPWTSAEDAILVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 84 79******************************************9986 PP
2	Myb_DNA-binding	47.5	4e-15	90	133	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T eE+ l+++++++ G++ W++ a+ ++ gRt++++k++w++ Oeu014617.2 90 KGAFTSEEERLIIELHAKIGNK-WARMAANLP-GRTDNEIKNYWNT 133 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MSCSISADSK EQSADSALFD ERGSYGGSSN GGVVLKKGPW TSAEDAILVD YVKKHGEGNW 60 NAVQKHSGLS RCGKSCRLRW ANHLRPNLKK GAFTSEEERL IIELHAKIGN KWARMAANLP 120 GRTDNEIKNY WNTRIKRRQR VGLPLYPPEL CMQAMQENEQ NLNASGIPGG DTECHNLLQS 180 NGYQIPDVTF DSLNTNQGVL PYVPEFPDSS ASSLLMKGLN SQFHSFIPHI PRRQKRTREP 240 DECVSWYSNS TSDDIPSLDR VQNDGYQNKM SQLAVPCFPY DPDPVTKKLL SFGVNHSHSI 300 LNGNFSASKP TAGAVKLELP SLQRQETSLD RWKSPPLPPV HELVDSFIQS PQSVPLPSDC 360 PSPRSSGLLE ALVYEANSLG NSRNQSSEKS KSSSMTSHNN VTDSSAFKTS STEFRDYHDA 420 KSPLGNSIGS ILSECTPRCD NGSSLDENIP GIEQSWTLDG EKREYLNQLQ NSRPDAVIGS 480 CWLEQSTFCL KEHGTVMDDI TALLGDDLDT EVKDTIPGTS ALSSEWCLTW NNMPAVSQIS 540 ELP*

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MSCSISADSK EQSADSALFD ERGSYGGSSN GGVVLKKGPW TSAEDAILVD YVKKHGEGNW  60
NAVQKHSGLS RCGKSCRLRW ANHLRPNLKK GAFTSEEERL IIELHAKIGN KWARMAANLP  120
GRTDNEIKNY WNTRIKRRQR VGLPLYPPEL CMQAMQENEQ NLNASGIPGG DTECHNLLQS  180
NGYQIPDVTF DSLNTNQGVL PYVPEFPDSS ASSLLMKGLN SQFHSFIPHI PRRQKRTREP  240
DECVSWYSNS TSDDIPSLDR VQNDGYQNKM SQLAVPCFPY DPDPVTKKLL SFGVNHSHSI  300
LNGNFSASKP TAGAVKLELP SLQRQETSLD RWKSPPLPPV HELVDSFIQS PQSVPLPSDC  360
PSPRSSGLLE ALVYEANSLG NSRNQSSEKS KSSSMTSHNN VTDSSAFKTS STEFRDYHDA  420
KSPLGNSIGS ILSECTPRCD NGSSLDENIP GIEQSWTLDG EKREYLNQLQ NSRPDAVIGS  480
CWLEQSTFCL KEHGTVMDDI TALLGDDLDT EVKDTIPGTS ALSSEWCLTW NNMPAVSQIS  540
ELP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.3	1e-106	MYB family protein