PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014923.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 203aa MW: 23293.4 Da PI: 7.1953

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014923.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.8	5.8e-21	47	98	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++eq++ Le+ Fe+++++ e++e++A++lgL+ rqV vWFqNrRa++k Oeu014923.1 47 RKLSQEQVNLLETSFENEQKLESERKEKIASELGLDPRQVAVWFQNRRARWK 98 5799***********************************************9 PP
2	HD-ZIP_I/II	120.4	9.4e-39	46	136	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kr+ls+eqv+lLE+sFe+e+kLe+erK+++a+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+++d + e++rLe+ev +L+e+++e Oeu014923.1 46 KRKLSQEQVNLLETSFENEQKLESERKEKIASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKAKHDCTVVEKCRLENEVLTLKEQVSE 136 9**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MGLIAQYYPE IYSQVVQEEG IEKTRKKSRR KKSKGKCGNG SEAAGKRKLS QEQVNLLETS 60 FENEQKLESE RKEKIASELG LDPRQVAVWF QNRRARWKSK KLEEEYSKLK AKHDCTVVEK 120 CRLENEVLTL KEQVSEAEKE IQRLLERGDG FSSINSPSSS FSMELLEPTF LGGFGMEGLE 180 NVLYVPQNDY INGLEWVKVY DM*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	48	RRKKSKGKCGNGSEAAGKRK
2	30	49	RRKKSKGKCGNGSEAAGKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18550.1	6e-51	HD-ZIP family protein