PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu015334.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 210aa    MW: 23391 Da    PI: 8.496
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu015334.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-051234123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C++C+k Fs+k  L  H++ H
  Oeu015334.1 12 YGCKYCNKEFSSKQALGGHQNGH 34
                 67*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MNVTDLVKER VYGCKYCNKE FSSKQALGGH QNGHKVERVT ERNARKGLKT SFGHGMNSLP  60
FQSSFNTGPE IFNQSTRNRF YNPQNMQQRM LADGQPNSNL PMTREPHAHE PLQEFSHGYP  120
IWPNHHLTDS QFIAASTGME NHTLNFSNLT FGTASSKTRT MLGVSGGIAT VNSSQSIHDT  180
NLRAEINSQI TDSTNQQCPY SELDLSLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.15e-11C2H2 family protein