PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu015335.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 206aa    MW: 22577.2 Da    PI: 8.3319
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu015335.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.5e-051234123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C++C+k F +k  L  H++ H
  Oeu015335.1 12 YGCKYCDKKFITKQALGGHQNAH 34
                 67******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MHVTDNVREW IYGCKYCDKK FITKQALGGH QNAHTVERVI ERNAREGVET NFGHVGCPSY  60
RGVISVLFKG SLNGGPEIFN QSMTNRSYNP QSNGSPNSNL PLIQEPHAPE PLQGFTHGYL  120
IWQNPHSTGS QFIAPLPGME SHTRNFLNST SGTTRTMLAM SGGLSTASSS QYIYDTNARA  180
ETNSKIPGST KQKCQESELD LSLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.12e-10C2H2 family protein