PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu015561.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 554aa MW: 62784.8 Da PI: 5.0699

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu015561.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41	3.3e-13	309	352	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N+++ +Lr l+Pk + Kl+ a+iL A++Y+k+Lq Oeu015561.1 309 MAERKRRKKLNDRLYTLRALVPKiS------KLDRASILGDAIDYVKELQ 352 79*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MLLPNFLERL RTLVGIKSWD YIVLWKLSDD HRRVEWMDCC CAGTENIQNG EEEPLFFPSS 60 SALPCRDVTC PHPRIKSCDL LEQLPASITL ESGIHARTFL SNQASWLNFS NNSDSNVSEE 120 TLGTRVLIPL SIGIIELFVT KQVPEDQQVI DIVRAQCNIF LEQQAMSNSG NTDSSFSLSA 180 NGIQVPPEPL KENLYLPHDI SVERIHLCNS PMNVSNFQQF SGTGETGNTS NNIFFEGTYV 240 SNPFAPSIEN GFQEMETLQS NIFGSQVKDD DSFTRENNRS DDSDPNDDEE DAAKYGRRTG 300 KGPQCKNLMA ERKRRKKLND RLYTLRALVP KISKLDRASI LGDAIDYVKE LQKQVKELQI 360 ELEGHSDDED ARKTSGTNSN DNNVQPVSHR GPSANVGINI SKQEHDSENT NEKLQLQMEP 420 QVEVFQLDGN ELFVKIFCEH KSNGFVNLLE ALNSLGLEIT DVNTTRHTCL VSNIFKVEKR 480 DSETIQANHV RESLLELTRN PSRIWAEIEK TLENGNIDHD YHHRHLHHDY SDHSLLHNHD 540 PQMNPHPVQR LHH*

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MLLPNFLERL RTLVGIKSWD YIVLWKLSDD HRRVEWMDCC CAGTENIQNG EEEPLFFPSS  60
SALPCRDVTC PHPRIKSCDL LEQLPASITL ESGIHARTFL SNQASWLNFS NNSDSNVSEE  120
TLGTRVLIPL SIGIIELFVT KQVPEDQQVI DIVRAQCNIF LEQQAMSNSG NTDSSFSLSA  180
NGIQVPPEPL KENLYLPHDI SVERIHLCNS PMNVSNFQQF SGTGETGNTS NNIFFEGTYV  240
SNPFAPSIEN GFQEMETLQS NIFGSQVKDD DSFTRENNRS DDSDPNDDEE DAAKYGRRTG  300
KGPQCKNLMA ERKRRKKLND RLYTLRALVP KISKLDRASI LGDAIDYVKE LQKQVKELQI  360
ELEGHSDDED ARKTSGTNSN DNNVQPVSHR GPSANVGINI SKQEHDSENT NEKLQLQMEP  420
QVEVFQLDGN ELFVKIFCEH KSNGFVNLLE ALNSLGLEIT DVNTTRHTCL VSNIFKVEKR  480
DSETIQANHV RESLLELTRN PSRIWAEIEK TLENGNIDHD YHHRHLHHDY SDHSLLHNHD  540
PQMNPHPVQR LHH*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	318	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-130	bHLH family protein