PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu015663.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 208aa    MW: 23013.7 Da    PI: 6.8612
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu015663.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA48.53e-15167202137
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkp 37 
                  +ep+YVNaKQy++Il+RR+ Rak+e e+k  +ksrk+
  Oeu015663.1 167 QEPVYVNAKQYHGILRRRHLRAKAELESKA-IKSRKE 202
                  69***************************9.999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MHSNSKNSNL RESSFYEVSN STLLSEPWWK KTGYSSFPTV MMQGNASDST SLEQAMDGQS  60
HSEDGTNDGD AAAAKQSRCN IPPHPDRNYG VEDPNLPHGS LTIRPRSFDN LVQPPHQEFV  120
GHSIACASNP RDPYHGGMMA AYGQPLVPPD LLDVHQARIP LPLEMAQEPV YVNAKQYHGI  180
LRRRHLRAKA ELESKAIKSR KELELVS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.22e-41NF-YA family protein