PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu015920.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Nin-like
Protein Properties Length: 251aa    MW: 29095.8 Da    PI: 11.3711
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu015920.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.31.1e-261867352
       RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                 k +s e++s+yF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ sl
  Oeu015920.1 18 KILSKETISQYFYMPITKAARELNVGLTLLKKRCRELGIRRWPHRKLMSL 67
                 56899******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MKRVKRHREV KTHTSNFKIL SKETISQYFY MPITKAAREL NVGLTLLKKR CRELGIRRWP  60
HRKLMSLQTL IKNVQVLQEL GQEKGEGKLR DAIQILEQER KLMEEVPDLK LADKTKRLRQ  120
ACFKVNYKKR KLMAGMPSMI SKSKSRGSSG DNPTAIGGGQ RGPTFRDLRT SVRERSSPAM  180
VDFVTERTDF QRFRDFISSS FPSRHFWSPP VVALVTTASD FYRFTDFDFS SFRSRHMGFA  240
GGRLLRERKD *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.18e-55Nin-like family protein