PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016098.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HSF
Protein Properties Length: 205aa    MW: 24079.7 Da    PI: 9.9592
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016098.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1041.3e-32301332102
                   HHHHHHHHHCTG............GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXX CS
  HSF_DNA-bind   2 Flkklyeilede............elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksF 86 
                   Fl+k+y++le e            e k+++sw+++gn f+v+ + ef++ +LpkyFkhsnf+SF+RQLn+YgFkk+ +++         weF+h +F
   Oeu016098.1  30 FLSKTYDLLEAEeekrggeeaseiERKKIVSWNSQGNGFIVWSPAEFSEIMLPKYFKHSNFSSFIRQLNTYGFKKTASKR---------WEFQHVKF 117
                   9*********6666677777777799**************************************************9988.........******** PP

                   XXXXXXXXXXXXXXXX CS
  HSF_DNA-bind  87 kkgkkellekikrkks 102
                   ++g ++ll +i rkk 
   Oeu016098.1 118 QRGYRHLLAEITRKKC 133
                   *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MASPVAHAPA PAETSRKINR STRNKCPTPF LSKTYDLLEA EEEKRGGEEA SEIERKKIVS  60
WNSQGNGFIV WSPAEFSEIM LPKYFKHSNF SSFIRQLNTY GFKKTASKRW EFQHVKFQRG  120
YRHLLAEITR KKCESSAFPA YLKASEEHKC RAMEEENTRA LMMLMEENKN LRREKTELQM  180
QIAHFKTIEM KLWECYQNKV RRLC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.17e-37HSF family protein