PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016179.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 432aa MW: 49348.6 Da PI: 9.7226

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016179.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.8e-09	176	223	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq Oeu016179.1 176 SHSLAERVRREKISERMKALQALVPGC----DKVTGKALVLDEIINYVQSLQ 223 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MAAFSSNNLH HHPFLIDSVV LQPNSSIIKI FEQLNNADTT EFHQDIVPVN GGVLQNRCLL 60 DQSTKVSLSN KESNSLMSIK NKYSMESSSV SDKYLSSDQQ VSQNITSMVE KKQQRKRKLM 120 RSLSNSAQSK DMREVKGKKQ KNTVDKKQPG EEKKSSEEDP KGFIHVRARR GQATDSHSLA 180 ERVRREKISE RMKALQALVP GCDKVTGKAL VLDEIINYVQ SLQNQVEFLS MKLATVNPMF 240 YDFGMDFDSF MVRPHQSLNS LASNLQTVQQ CSTQSPVIRE TDTAPNCYSL LDSSSPLLFQ 300 LAHMPNTLPQ LYYSFISSMQ LICSISFRNC SNDNRIQLKS LIRRILVIRI LRNLMRGKMG 360 ESILKELGCK ELEIAHAEMD VIPKYQIVME NRRRWQSMNK EYEEAKSVDI YNRPMRSDFI 420 FPIRSFVLVQ S*

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MAAFSSNNLH HHPFLIDSVV LQPNSSIIKI FEQLNNADTT EFHQDIVPVN GGVLQNRCLL  60
DQSTKVSLSN KESNSLMSIK NKYSMESSSV SDKYLSSDQQ VSQNITSMVE KKQQRKRKLM  120
RSLSNSAQSK DMREVKGKKQ KNTVDKKQPG EEKKSSEEDP KGFIHVRARR GQATDSHSLA  180
ERVRREKISE RMKALQALVP GCDKVTGKAL VLDEIINYVQ SLQNQVEFLS MKLATVNPMF  240
YDFGMDFDSF MVRPHQSLNS LASNLQTVQQ CSTQSPVIRE TDTAPNCYSL LDSSSPLLFQ  300
LAHMPNTLPQ LYYSFISSMQ LICSISFRNC SNDNRIQLKS LIRRILVIRI LRNLMRGKMG  360
ESILKELGCK ELEIAHAEMD VIPKYQIVME NRRRWQSMNK EYEEAKSVDI YNRPMRSDFI  420
FPIRSFVLVQ S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	141	RKRKLMRSLSNSAQSKDMREVKGKKQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	7e-52	bHLH family protein