PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016220.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 125aa    MW: 14095.7 Da    PI: 11.4384
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016220.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.3e-094383954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  r RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  Oeu016220.1 43 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAVHYLKFL 83
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MEAMREMIFR IAMMQPIHID PVSVKPPKRK NVKISKDPQS VAARHRRERI SERIRILQRL  60
VPGGTKMDTA SMLDEAVHYL KFLKKRVQAL EQAASNRPMG AGNYSSLIKT WQPVQMGGSV  120
PMLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.17e-42bHLH family protein