PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016331.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

E2F/DP

Protein Properties

Length: 373aa MW: 42109.5 Da PI: 9.6385

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016331.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.7	1.9e-23	14	79	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg Oeu016331.1 14 RKQKSLGLLCSNFLSLYNRDGVESIGLDDAASRL---GV--ERRRIYDIVNVLESVGILARKAKNRYTWKG 79 79***************999********.....****************************98 PP
2	E2F_TDP	75.2	6.7e-24	160	241	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse......dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +++ + ++l+++ak L+ + +++k+RR+YDi+NVL++++ iek ++k+++rw g Oeu016331.1 160 RKEKSLGLLTQNFVKLFLCTDMELISLDDAAKLLLGDgkhtsmTTRTKVRRLYDIANVLSSMKFIEKihhpeTRKPAFRWLG 241 79***************************************999********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MSTESGSKYT PYCRKQKSLG LLCSNFLSLY NRDGVESIGL DDAASRLGVE RRRIYDIVNV 60 LESVGILARK AKNRYTWKGF QAIPKALQDL KNEGLKENCH GADGNCSEKV KSSFFYFFSQ 120 VSDDDEDETY SDTNNLSQND KSNPNSFRKL SEPKKSGDNR KEKSLGLLTQ NFVKLFLCTD 180 MELISLDDAA KLLLGDGKHT SMTTRTKVRR LYDIANVLSS MKFIEKIHHP ETRKPAFRWL 240 GLQENGPANE SKKRVFGTDL TNSTLKRCKV DGNAELQLQK QVKNQSSENE VDTSRTSAKS 300 FQFGPFAPVN VPKVEASGNG KPKQVIHWES LASTYRPQYH NQALRDLFSH YVEAWKSWYS 360 EVAGKKPIQL MS*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MSTESGSKYT PYCRKQKSLG LLCSNFLSLY NRDGVESIGL DDAASRLGVE RRRIYDIVNV  60
LESVGILARK AKNRYTWKGF QAIPKALQDL KNEGLKENCH GADGNCSEKV KSSFFYFFSQ  120
VSDDDEDETY SDTNNLSQND KSNPNSFRKL SEPKKSGDNR KEKSLGLLTQ NFVKLFLCTD  180
MELISLDDAA KLLLGDGKHT SMTTRTKVRR LYDIANVLSS MKFIEKIHHP ETRKPAFRWL  240
GLQENGPANE SKKRVFGTDL TNSTLKRCKV DGNAELQLQK QVKNQSSENE VDTSRTSAKS  300
FQFGPFAPVN VPKVEASGNG KPKQVIHWES LASTYRPQYH NQALRDLFSH YVEAWKSWYS  360
EVAGKKPIQL MS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	264	268	TLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-110	E2F/DP family protein