PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016529.4
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 748aa    MW: 84318 Da    PI: 6.1006
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016529.4genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.22.4e-1163737441374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l++lL+ cA+av+s+d + a+++L++++++++p gd mqRla+ f+ +L+ar+a+s++++ykal   +ts    ++ l+a++++  ++P+ k+s++ a
  Oeu016529.4 373 LRTLLTLCAQAVASDDRRSANEFLKQIRQHSTPIGDGMQRLAHWFADGLEARMAGSGTQIYKALINMPTS---AADILKAYHIYLATCPFRKISNFFA 467
                  5789************************************************************999998...8************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N++I++a+++++r+HiiDf+i +G+QWp++lq L+sRp+gpp+lRiTg++ p +g   +e++eetg+rLa++Ae+++vpfef + +a+++e++++e+L
  Oeu016529.4 468 NKTIMNAAKNATRLHIIDFGILYGFQWPCFLQRLSSRPGGPPKLRITGIDLPCPGfrPSERVEETGRRLASYAETFNVPFEFIA-IAQKWETIKIEDL 564
                  ****************************************************99999***************************.7************ PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                   v+++E+++Vn+ ++  +llde+v ++s+r+ vL+l++++sP+v+v+   +  +n++ F +rf eal +ys++fd+lea++pre +er+ +E+ ++gr
  Oeu016529.4 565 MVNKDEVVVVNCLYRFRNLLDETVVVNSPRNIVLNLIRKISPDVFVLGILNGAYNAPFFITRFREALFHYSSFFDMLEANIPREIHERMLLEKTIFGR 662
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  e++nv+acegaer+er et++ W+ r  +aGF+++p +e+++   k  +   + + + ++e+ +++++gWk+r L+++S+Wr
  Oeu016529.4 663 EAMNVIACEGAERIERPETYKLWQVRNIRAGFEQLPQNEEIMRMGKDWVTSSYHKDFVIDEDGHWMLQGWKGRVLYALSSWR 744
                  **************************************************999888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    
MVMDRNFRSY NGTASGIKHD NQSVSVFPDP NLINNLRVSN SFSAGNYADV PPFSSHLNSN  60
TLVQSSDADT LEDYDFSDVV LKYINHILME EDVEEKACMF QESAALQAAE RSFYEVLGGQ  120
YPASTNYYLR VPNLDQNVEN SDENFSGDYI NCCATGNADL FQDWNTDPYC TGFDEQHVSV  180
GIASQLTSQS SYSPSSSTST FTDGPADSPV STLKIPNIFN DSQSVMQFKK GVEEAAKFLP  240
NGNNLVVDLR YNELLGKEKK EGTNGMVFKV EKKYDNEDSA DVSRGKKNPY QETTSMHEER  300
SYKQTAVCTE STASPEMFDM VLLCSGGRNE SALRKALQNE ATKNALQNSQ PKGSNGGKNR  360
GKKPGGRRNV VDLRTLLTLC AQAVASDDRR SANEFLKQIR QHSTPIGDGM QRLAHWFADG  420
LEARMAGSGT QIYKALINMP TSAADILKAY HIYLATCPFR KISNFFANKT IMNAAKNATR  480
LHIIDFGILY GFQWPCFLQR LSSRPGGPPK LRITGIDLPC PGFRPSERVE ETGRRLASYA  540
ETFNVPFEFI AIAQKWETIK IEDLMVNKDE VVVVNCLYRF RNLLDETVVV NSPRNIVLNL  600
IRKISPDVFV LGILNGAYNA PFFITRFREA LFHYSSFFDM LEANIPREIH ERMLLEKTIF  660
GREAMNVIAC EGAERIERPE TYKLWQVRNI RAGFEQLPQN EEIMRMGKDW VTSSYHKDFV  720
IDEDGHWMLQ GWKGRVLYAL SSWRPVY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein