PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016730.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 401aa MW: 45138.7 Da PI: 4.9497

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016730.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.1	2.8e-12	191	242	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ Oeu016730.1 191 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 242 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MEKEGNYSAT GNYPAIDYSI ENHQQQQQIM RPEIGETSAD NTCQMVDYMI NNHPLQSSNF 60 CGSTSLDKLS FADVMQLADF GPKLALNQAR TSDDRETAGG IDPVYFLKFP VLNERLQDDQ 120 SLLGEAQALG DNQESNGKAV EEGGEDMFEE NNSVQLRFLG KNLEKNPVTE SIKNKRKRPR 180 TIKTSEEVES QRMTHIAVER NRRKQMNEHL RVLRSLMPGS YVQRGDQASI IGGAIEFVRE 240 LEQLLQCLES QKRRRLYGDG QRPIGDPSLV VQQQQPQPQF LIPPVPNPLN DQVRLVEHET 300 GLHEETAESK SYLADVEVKV LGFDALIKIL SRRRPGQLIK AIAALEDLQL NILHTNITTI 360 EQTVLYSFNV KITAEARFTA EDIANSVQQI FSFIHAESNT *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MEKEGNYSAT GNYPAIDYSI ENHQQQQQIM RPEIGETSAD NTCQMVDYMI NNHPLQSSNF  60
CGSTSLDKLS FADVMQLADF GPKLALNQAR TSDDRETAGG IDPVYFLKFP VLNERLQDDQ  120
SLLGEAQALG DNQESNGKAV EEGGEDMFEE NNSVQLRFLG KNLEKNPVTE SIKNKRKRPR  180
TIKTSEEVES QRMTHIAVER NRRKQMNEHL RVLRSLMPGS YVQRGDQASI IGGAIEFVRE  240
LEQLLQCLES QKRRRLYGDG QRPIGDPSLV VQQQQPQPQF LIPPVPNPLN DQVRLVEHET  300
GLHEETAESK SYLADVEVKV LGFDALIKIL SRRRPGQLIK AIAALEDLQL NILHTNITTI  360
EQTVLYSFNV KITAEARFTA EDIANSVQQI FSFIHAESNT *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	203	RMTHIAVERNRR
2	252	256	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-135	bHLH family protein