PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016906.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 111aa    MW: 12684.6 Da    PI: 9.8587
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016906.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.73.7e-29959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krie k+nr+vtfskRr g+lKKA+E+SvLCda+v +i+fs++gk+yey++
  Oeu016906.1  9 KRIEKKINRHVTFSKRRSGLLKKAHEISVLCDADVGLIVFSPKGKIYEYAT 59
                 79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MGRGRVELKR IEKKINRHVT FSKRRSGLLK KAHEISVLCD ADVGLIVFSP KGKIYEYATG  60
ACMGRILERY ERYSYEESQL TATNIESPVS WTVEYAKLEA RLETLQTSQR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-44MIKC_MADS family protein