PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu016921.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 340aa    MW: 38012.9 Da    PI: 6.693
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu016921.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.44e-062292671154
                  HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  Oeu016921.2 229 ARKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 267
                  6778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDWNQSQMRE GDKAESSFRS MLQEDLSSSN SNFHQETGTA SSQDHWREKL YSAGSEDSNA  60
NEYKQINRVY SLDSSGETES STITSQQGFP ADSAAYGLLL SENQPQHSTY ENRPMNFPYP  120
MNYGSNTGEW TPSWNKFPQT FLRTTVPQKQ SPGNIYFTNK TPFWNASDDV RPSFFSSLPT  180
PIPTPALDEK PKNTLEIRDL GTTAKKTSTQ ASNKRPRNET PSPLPAFKAR KEKMGDRITA  240
LQQLVSPFGK TDTASVLSEA IEYIKFLHEQ VGVLSTPYMK SGSPIQLQQN SDKSKVPEQG  300
PRQDLRSRGL CLVPISSTYP VTHESSVDFW TPTFGGTFR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.11e-71bHLH family protein