PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016980.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 201aa MW: 21622.8 Da PI: 9.881

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016980.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.4	6.4e-35	50	117	6	73
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 +++++hTkv+gR+RRvR++a+caar+F+L++eLG+ + ++tieWLl+qa+pai+++tgt++ +a + Oeu016980.1 50 LSTKDRHTKVNGRGRRVRIPALCAARVFQLTRELGHRSEGETIEWLLRQAEPAIIAATGTGTVPADKI 117 689*********************************************************77777333 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MPVQPSRHHL VQPLRAVIPH PATAAAVESS AAKPAKTKLG LSKTANGSPL STKDRHTKVN 60 GRGRRVRIPA LCAARVFQLT RELGHRSEGE TIEWLLRQAE PAIIAATGTG TVPADKISTA 120 PTIPLSRSPA SVQAPVNRSL QPMLPPSCRL DLCQASPPPM GLEFDPNAYR HMPFTALLLQ 180 PAAEEEEEAE ERHRGVVEDR *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	4e-45	TCP family protein