PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017027.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 663aa MW: 72139.4 Da PI: 6.0296

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017027.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.7e-13	483	528	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L Oeu017027.1 483 NHVEAERQRREKLNQKFYALRAVVPNV-----SKMDKASLLGDAISYISEL 528 799*********************6.....5**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MNLWSSSITT KTAATTITTT DDNASMMEAF MSSSSDLGSF WPAPYAPNPA DPSKSSSSAA 60 ATAATAQFFN QETLQKRLLA LMEGAQESWT YAIFWQSSVA DYGGPSQLGW GDGYYKGEEN 120 KVKRKTAASP AEQENRKKVL RELNSLISGP QSSADDAVDE EVTDTEWFFL ISMAQSFVNG 180 SGLPGQASYS SSPIWIAGAD RLSVSHCERA RQAQIFGIET MVCIPSSNGV VELGSTEVIF 240 QSSDLMTKVR VLFNFNGMEM GSVAPAPGPG SGSRSGSWAA LAENDPSALW LTDPSSSGVE 300 MRDSLNDSNA NINNNGVGSS IPSVSASKQI LFGNENPSTS TLTENPHHHH HQQAPGFITR 360 ELNFSDYGID GDSVRKVTCK PESGELLNFR ESTKGSVCSG NGSLFGIQGE NYNNNNNNVS 420 NKIKNKKTSP TSRGSNEEGM LSFTSDLETS VVKEGDSSRV VDPEKRPRKR GRKPANGREE 480 PLNHVEAERQ RREKLNQKFY ALRAVVPNVS KMDKASLLGD AISYISELKS KLQRVELDKE 540 ELKSQLDSVK KDLATKEPRV LDPPPERDIK VPSHGGNKIV DVEVEVKIIG WDAMIRVQSS 600 KSNHPAARLM MAFKELDLDV HHASVSVVND LMIQQATVNM GSRFYTKEQL RVALTSKVAE 660 SR*

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MNLWSSSITT KTAATTITTT DDNASMMEAF MSSSSDLGSF WPAPYAPNPA DPSKSSSSAA  60
ATAATAQFFN QETLQKRLLA LMEGAQESWT YAIFWQSSVA DYGGPSQLGW GDGYYKGEEN  120
KVKRKTAASP AEQENRKKVL RELNSLISGP QSSADDAVDE EVTDTEWFFL ISMAQSFVNG  180
SGLPGQASYS SSPIWIAGAD RLSVSHCERA RQAQIFGIET MVCIPSSNGV VELGSTEVIF  240
QSSDLMTKVR VLFNFNGMEM GSVAPAPGPG SGSRSGSWAA LAENDPSALW LTDPSSSGVE  300
MRDSLNDSNA NINNNGVGSS IPSVSASKQI LFGNENPSTS TLTENPHHHH HQQAPGFITR  360
ELNFSDYGID GDSVRKVTCK PESGELLNFR ESTKGSVCSG NGSLFGIQGE NYNNNNNNVS  420
NKIKNKKTSP TSRGSNEEGM LSFTSDLETS VVKEGDSSRV VDPEKRPRKR GRKPANGREE  480
PLNHVEAERQ RREKLNQKFY ALRAVVPNVS KMDKASLLGD AISYISELKS KLQRVELDKE  540
ELKSQLDSVK KDLATKEPRV LDPPPERDIK VPSHGGNKIV DVEVEVKIIG WDAMIRVQSS  600
KSNHPAARLM MAFKELDLDV HHASVSVVND LMIQQATVNM GSRFYTKEQL RVALTSKVAE  660
SR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	465	473	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-157	bHLH family protein