PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017066.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 654aa MW: 72845.6 Da PI: 6.4239

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017066.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65	1e-20	89	144	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t+ q++e+e+lF+++++p+ ++r +L++ lgL+ rqVk+WFqNrR+++k Oeu017066.1 89 KKRYHRHTARQIQEMEALFKECPHPDDKQRMKLSQDLGLKPRQVKFWFQNRRTQMK 144 688899***********************************************998 PP
2	START	128.8	6.6e-41	206	353	69	206
GGCT-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-..TTS--.-TTSEE-EESSEEE CS START 69 keqWdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvds..eqkppesssvvRaellpSgi 152 + +W e ++ +a+tl+v+ sg g l+lm+aelq+lsplvp R+ f+Ry++ ++g w+ivd +d+ +++pp s ++ R ++pSg+ Oeu017066.1 206 N-KWMELFPsiisRAKTLQVVHSGvsghstGSLHLMYAELQVLSPLVPtREAHFLRYCQHnAEEGAWAIVDFPLDNfqTSYPP-SFPYYR--RRPSGC 299 5.78888888888*********************************************9**********72255666.899999..** PP EEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 153 liepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206 +i++++ng+s+vtwveh++++++++h +++++v++g+a+ga++w+a lqrqc++ Oeu017066.1 300 IIQDMPNGYSRVTWVEHAEVEDSSIHPIFNHFVSNGMAFGAQRWLAVLQRQCQR 353 **************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MYGDCQVLSS VGGNAIPSDT LYSSSIQNPN FNFMANINPF NIFSPINVAK EENVLAKSKE 60 EMESGSGSEH MEGVSGNEQE TEVQPQPKKK RYHRHTARQI QEMEALFKEC PHPDDKQRMK 120 LSQDLGLKPR QVKFWFQNRR TQMKPKPYQL IISLLLMIMD DLKFSFIELS ITHIFVTSTS 180 SDFYFYFLMG KGWGWGLLPW EILLFNKWME LFPSIISRAK TLQVVHSGVS GHSTGSLHLM 240 YAELQVLSPL VPTREAHFLR YCQHNAEEGA WAIVDFPLDN FQTSYPPSFP YYRRRPSGCI 300 IQDMPNGYSR VTWVEHAEVE DSSIHPIFNH FVSNGMAFGA QRWLAVLQRQ CQRFASFMAR 360 NISDLGVIPS PEARKNLMNL AQRMIRTFCL NISTCCGQSW TALSDSAEDT VRITTRKVTE 420 PGQPNGLILG AVSTIWLPFP HNKVFDFLRD EQRRIQLDVL SNGNSLHEVA HIANGSHPGN 480 SVSLLRINVA SNSSQNVELM LQESCTDDSG SIVVYTTIDV DSIQLAMNGE DPSCIPLLPL 540 GFIISPMGHA INDSSITSED TENGNLQPDS GCLLTVGLQV LASTIPTAKL NLSSVTAINH 600 HMCNTIQQIS SALSSGNGNG NCPNNNGNFF STSVEPQNAE PVSPTKQNRV SMS*

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MYGDCQVLSS VGGNAIPSDT LYSSSIQNPN FNFMANINPF NIFSPINVAK EENVLAKSKE  60
EMESGSGSEH MEGVSGNEQE TEVQPQPKKK RYHRHTARQI QEMEALFKEC PHPDDKQRMK  120
LSQDLGLKPR QVKFWFQNRR TQMKPKPYQL IISLLLMIMD DLKFSFIELS ITHIFVTSTS  180
SDFYFYFLMG KGWGWGLLPW EILLFNKWME LFPSIISRAK TLQVVHSGVS GHSTGSLHLM  240
YAELQVLSPL VPTREAHFLR YCQHNAEEGA WAIVDFPLDN FQTSYPPSFP YYRRRPSGCI  300
IQDMPNGYSR VTWVEHAEVE DSSIHPIFNH FVSNGMAFGA QRWLAVLQRQ CQRFASFMAR  360
NISDLGVIPS PEARKNLMNL AQRMIRTFCL NISTCCGQSW TALSDSAEDT VRITTRKVTE  420
PGQPNGLILG AVSTIWLPFP HNKVFDFLRD EQRRIQLDVL SNGNSLHEVA HIANGSHPGN  480
SVSLLRINVA SNSSQNVELM LQESCTDDSG SIVVYTTIDV DSIQLAMNGE DPSCIPLLPL  540
GFIISPMGHA INDSSITSED TENGNLQPDS GCLLTVGLQV LASTIPTAKL NLSSVTAINH  600
HMCNTIQQIS SALSSGNGNG NCPNNNGNFF STSVEPQNAE PVSPTKQNRV SMS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G46880.1	1e-170	HD-ZIP family protein