PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu017186.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 324aa    MW: 36231.7 Da    PI: 9.5231
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu017186.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP88.31.7e-2751180387
          TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................................... 65 
                  g+kdrhsk+ T +g+RdRR+Rls+++a+++++Lqd+LG+ ++sk i+WLl + k++i++l+ +                                   
  Oeu017186.1  51 GGKDRHSKVRTLRGLRDRRIRLSVPTAIQLYELQDKLGLSQPSKVIDWLLDATKHEIDKLPPLlmptgmtfsqfpgdhlssglsqfsdanqsyakdlg 148
                  78*************************************************************99888888777776666666655555444444443 PP

          TCP  66 ......ssssa.......seceaesssssasnsss 87 
                        +           + c++++++++++++++
  Oeu017186.1 149 inhaffP---CkeelgikNVCNHVERVQQNQENQE 180
                  3333220...0333333344555555555554444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MNSRSEKDFR AKQEDDANIS SKFSKIPSSS SRQWSSTLKN PRIVRVSRNF GGKDRHSKVR  60
TLRGLRDRRI RLSVPTAIQL YELQDKLGLS QPSKVIDWLL DATKHEIDKL PPLLMPTGMT  120
FSQFPGDHLS SGLSQFSDAN QSYAKDLGIN HAFFPCKEEL GIKNVCNHVE RVQQNQENQE  180
GFGGYLAQNL FPLGNYQSRF PTPSINNSYF NWDTNSNLSL SQFGAEESHN NISAPSSMAL  240
PLSSQLYSYP SVTTVPLLNF PPLIPSFMTA SMESELRQVN HFQQQNSLMP TLHLISSPMK  300
SFGSNANQTV RLPEIGSKES NSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.19e-34TCP family protein