PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017496.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 219aa MW: 24725.3 Da PI: 7.9942

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017496.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.8	0.00022	19	48	4	36
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapsk 36 + +E++RR++++ +++L llP +sk Oeu017496.1 19 ERKVVEKNRRNQMKIFYSNLLCLLPDH---GSK 48 56899********************97...444 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MEKGKTKSSS SASRSRKIER KVVEKNRRNQ MKIFYSNLLC LLPDHGSKID EAVAYIESLK 60 TKVEKMKEKK ESLMPRKRSH SCITSEIQAS TKSSQPLVEV HDMGPNMDVI LVSGLDDLAK 120 FYSILHLLRE DGIEVLNSNF SIHGNSSFHI LHDKAGKSRM GFEATTMSRR LKDLICGSTC 180 SEVESNLDLW DYGMFQPDIW GLGISEVIDI ASEYSQWF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G20970.1	7e-12	bHLH family protein