PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu017501.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 226aa    MW: 25802.7 Da    PI: 7.5421
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu017501.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.3e-052067554
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  ++ E++RR+r++  +++L  llP+   + ++ +   +   ++v YI sL
  Oeu017501.1 20 RKISEKNRRNRMKILYSNLFGLLPNH--GLKQAMPLPDQIDEVVTYIESL 67
                 6789*********************7..4666688889999999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEKVKFRLCS SSTRAPRIER KISEKNRRNR MKILYSNLFG LLPNHGLKQA MPLPDQIDEV  60
VTYIESLKMK LEKMKETRVS LLPRKISNSC IITNEIQANT QSPPPLVEVQ DMGPNMDVIL  120
VTGLDHFSMF YNILHLLHED SIEVVNATFS VHGNSSFQIV HDKILKSSMG FGATTMKRRI  180
NDLIRGYACS EVESNYDLWD YEIQTDIWGF NAAEVTNAYS SFVYC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.11e-19bHLH family protein