PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017600.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 229aa MW: 26405.5 Da PI: 8.3474

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017600.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.00032	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k F ++ L H++ H Oeu017600.1 83 FECQYCFKIFANSQALGGHQNAH 105 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence
MEKNITDAES CMEKKVKLFG FELDLCQKRK EIEGDESVNS SSSSTVTSGR EKATLDKGEN 60 EKFNNETSLV PNKLEIDQEQ KKFECQYCFK IFANSQALGG HQNAHKKERM KKRRQQLQER 120 KGNMINYYHN IQPFQNSNRY YGSSAWFYDP SCHAQAEFTL YEESQISFGP YQRLPSQQDT 180 HIFSLTYPDD NRSRDRNMTP VVVRKPSSSP NPKSNCKTLD LKLGLSLE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06650.1	1e-12	C2H2 family protein