PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu017655.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 145aa    MW: 16030.8 Da    PI: 10.6
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu017655.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.21.3e-193872135
         GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                 Cs+C+ttkTplWR gp+g+k+LCnaCG++y kk++
  Oeu017655.1 38 CSSCHTTKTPLWRGGPSGPKSLCNACGIKYNKKRR 72
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MILIMIFDQI LNANSNLVFV SQTLDAEEKN PSTQIKTCSS CHTTKTPLWR GGPSGPKSLC  60
NACGIKYNKK RRQHLGLETA RTGKKKKRSN INKSNEIKEI LKMRFMALGS EVMLQRTGKL  120
MSKLREEEQA AILLMSLSCG SVSA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16988KKRRQHLGLETARTGKKKKR
27089KKRRQHLGLETARTGKKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-28GATA family protein