PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018288.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 202aa    MW: 21729.5 Da    PI: 9.3361
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018288.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-055577123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C++C++ F ++  L  H++ H
  Oeu018288.1 55 YDCQYCDRKFANSQALGGHQNAH 77
                 88******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MAQVQYQSKP CNNTTTNGRL KLFGFNVVEE EGIESTKTSG SPDSASFMVS NCQKYDCQYC  60
DRKFANSQAL GGHQNAHKKE RKQLKRAKMQ AASPKATLFP PPPHLLFQLP SPSWVCIPRS  120
SPDSHVSHGN AFPMNGKSIA NVPCTCSVGE SSLKSIGPES GKAHNGSLHR PSLSRFSMAN  180
DAPNVYDAFG LNLHLSLAPA P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.13e-12C2H2 family protein