PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018303.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 263aa MW: 29796.3 Da PI: 9.0655

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018303.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.1	3.8e-41	6	82	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dl+ ak+yhrrh++Ce hsk+p+v+v+g+e+rfCqqCsrfh+lsefD++krsCrrrL++hn+rrr+ q+ Oeu018303.1 6 CQVEGCNLDLTLAKNYHRRHRICENHSKSPKVIVAGIERRFCQQCSRFHDLSEFDDKKRSCRRRLSDHNARRRRLQP 82 *************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MQNPSCQVEG CNLDLTLAKN YHRRHRICEN HSKSPKVIVA GIERRFCQQC SRFHDLSEFD 60 DKKRSCRRRL SDHNARRRRL QPESIHLSSA GLSSLLYERT SQNVLFNVLP ISHSNRKGEN 120 IYNSMLTQAD DSLIRPSKTR ETYRRPCLPN DEIPSAIYSL HVESERSLSL QGTNPRALDQ 180 YLQSASSPLS IDNPWSLNRH KSTSMEGLKL GNASVDNPNW PFVQSAAAEG SSVSLVHSTN 240 LNHSGSFLLQ DFDLFKTPYD SR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	79	KKRSCRRRLSDHNARRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-44	SBP family protein