PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018395.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 330aa MW: 38779.9 Da PI: 8.9145

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018395.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.7	2.4e-21	45	141	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +Wt+++v++Li+a+++++e+ +++ l k++W+++s+ m erg+ +sp+qC++k++ lnk+yk+++e+ +++ ++e++ + + +++ Oeu018395.1 45 KWTDEMVKLLITAVSYVDEDALSTAnindrrkqfipLVKGKWRAISNSMVERGYIVSPQQCEDKFNVLNKKYKRLNEMLGRNnACEVVANPVVMERM 141 7************999887755447777788888*****************************************999668888888777777 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MLKFDQPMPL LEGNIDVRLN NFQGSSRWTN ILGIEKREPV WQRLKWTDEM VKLLITAVSY 60 VDEDALSTAN INDRRKQFIP LVKGKWRAIS NSMVERGYIV SPQQCEDKFN VLNKKYKRLN 120 EMLGRNNACE VVANPVVMER MNISDEMKEK AKKILTCKQL FYREMYSYHY RNRIFLLHDE 180 ALQNSLRFAL KVMYESKDVI QAAAKRQKLQ KDHAVVDIDG PKNYVDCTGS DPQSPKDLFN 240 ENFVLTKGVE GEQEEDQRLF SCSLQLKKKM LQIQGEMLEL EKKKFNWLKL SQEADRELIK 300 MKQENELMRL DNKRMAFELT CLEMDADRK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76870.1	6e-67	Trihelix family protein