PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018526.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

E2F/DP

Protein Properties

Length: 360aa MW: 40628 Da PI: 9.5852

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018526.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	74.7	9.6e-24	14	79	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+++ +++ l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg Oeu018526.1 14 RKQKSLGLLCSNFLSLYNRDGVETIGLDDAASRL---GV--ERRRIYDIVNVLESVGILARKAKNRYTWKG 79 79***************999********.....****************************98 PP
2	E2F_TDP	75.3	6.3e-24	148	229	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse......dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +++ + ++l+++ak L+ + +++k+RR+YDi+NVL++++ iek ++k+++rw g Oeu018526.1 148 RKEKSLGLLTQNFVKLFLCTDMELISLDDAAKLLLGDgkhtsmTTRTKVRRLYDIANVLSSMKFIEKihhpeTRKPAFRWLG 229 79***************************************999********************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MSTESGSKYT PYCRKQKSLG LLCSNFLSLY NRDGVETIGL DDAASRLGVE RRRIYDIVNV 60 LESVGILARK AKNRYTWKGF RAIPKALQDL KNEGLKENCH GADGNCSEKV NDDEDETYSD 120 TNNLSQNDKS NPNSLSKLSV PQKSGDNRKE KSLGLLTQNF VKLFLCTDME LISLDDAAKL 180 LLGDGKHTSM TTRTKVRRLY DIANVLSSMK FIEKIHHPET RKPAFRWLGL ENGPHNESKK 240 RVFGTDLTNS TLKRCKEDGN AKLQLQKQVR HQSLENEVDT LKTSAKSFQF GPFAPVNVPN 300 VEAPGNGKPK RVIDWENLAS TYRPRYHNQA LRDLFSHYAE AWKSWYAEVA GKEPIQLMP*

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MSTESGSKYT PYCRKQKSLG LLCSNFLSLY NRDGVETIGL DDAASRLGVE RRRIYDIVNV  60
LESVGILARK AKNRYTWKGF RAIPKALQDL KNEGLKENCH GADGNCSEKV NDDEDETYSD  120
TNNLSQNDKS NPNSLSKLSV PQKSGDNRKE KSLGLLTQNF VKLFLCTDME LISLDDAAKL  180
LLGDGKHTSM TTRTKVRRLY DIANVLSSMK FIEKIHHPET RKPAFRWLGL ENGPHNESKK  240
RVFGTDLTNS TLKRCKEDGN AKLQLQKQVR HQSLENEVDT LKTSAKSFQF GPFAPVNVPN  300
VEAPGNGKPK RVIDWENLAS TYRPRYHNQA LRDLFSHYAE AWKSWYAEVA GKEPIQLMP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	255	TLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-112	E2F/DP family protein