PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018542.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 195aa    MW: 21406.9 Da    PI: 4.4743
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018542.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC44.14.6e-143673135
        NF-YC  1 qlksfwekq...iekatdfknhelPlarikkilkaded 35
                 ql++fw++q   ie+a+df+nh+lPlarikki+kaded
  Oeu018542.1 36 QLQMFWTYQrreIEQANDFRNHQLPLARIKKIMKADED 73
                 89*****999999***********************98 PP
2NF-YC39.89.6e-137210569102
        NF-YC  69 nkrrtlkksdiaaavtrtdifdflvdivprdelk 102
                   +rrtl+k+diaaa+trtdifdflvdivprde+k
  Oeu018542.1  72 EDRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIK 105
                  579****************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MENNPHQTAA PASASQQAVY PSQPPYPQLL QQQQQQLQMF WTYQRREIEQ ANDFRNHQLP  60
LARIKKIMKA DEDRRTLQKN DIAAAITRTD IFDFLVDIVP RDEIKEEAAS LGAILGPPVV  120
ASGATGVPYY YPPMGQPMMG QPAMPGMDPG MYLQAPSPPT SQAWQSVWQT APDDGSYASC  180
GGTSSNQANL DGQE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17480RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48590.15e-48NF-YC family protein