PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018600.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 97aa    MW: 11050 Da    PI: 11.3499
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018600.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.11.3e-29959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krienk+ rqvtfskRr g+lKKA+E+Sv+Cdaeva+i+fs++gkl+ey++
  Oeu018600.1  9 KRIENKISRQVTFSKRRSGLLKKAHEISVMCDAEVALIVFSTKGKLFEYAT 59
                 79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    
MGRGRIQLKR IENKISRQVT FSKRRSGLLK KAHEISVMCD AEVALIVFST KGKLFEYATD  60
SRYVLTIISS KTHFKNLSIS FHNLSPRKIK NLNQIL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.19e-37MIKC_MADS family protein