PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018603.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WOX

Protein Properties

Length: 393aa MW: 45897.7 Da PI: 9.7844

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018603.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.2	3.8e-20	3	62	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t++ql++L+e++++ r psa++++++A +l +++ ++V++WFqN++a+e++ Oeu018603.1 3 SRWNPTADQLQALQEMYRRgVRSPSAQQIQQIAGNLrqfgKIEGKNVFYWFQNHKARERQ 62 7***************99************************************97 PP
2	Homeobox	63.2	3.8e-20	157	216	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t++ql++L+e++++ r psa++++++A +l +++ ++V++WFqN++a+e++ Oeu018603.1 157 SRWNPTADQLQALQEMYRRgVRSPSAQQIQQIAGNLrqfgKIEGKNVFYWFQNHKARERQ 216 7***************99************************************97 PP
3	Wus_type_Homeobox	106.8	1.4e-34	2	64	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt++Q++ L+e+y++G+r+P++++iq+i+ +L+++Gkie+kNVfyWFQN+kaRerqk+ Oeu018603.1 2 SSRWNPTADQLQALQEMYRRGVRSPSAQQIQQIAGNLRQFGKIEGKNVFYWFQNHKARERQKK 64 68***********************************************************96 PP
4	Wus_type_Homeobox	107.3	9.3e-35	156	218	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+Pt++Q++ L+e+y++G+r+P++++iq+i+ +L+++Gkie+kNVfyWFQN+kaRerqk+ Oeu018603.1 156 SSRWNPTADQLQALQEMYRRGVRSPSAQQIQQIAGNLRQFGKIEGKNVFYWFQNHKARERQKK 218 79***********************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MSSRWNPTAD QLQALQEMYR RGVRSPSAQQ IQQIAGNLRQ FGKIEGKNVF YWFQNHKARE 60 RQKKRREQEA SLSRKRKCDV FVNPESEHSE AMWMVHSSDY SFDRKLRPLM PKSTITASSS 120 TAFSAMPTPC CYCIHHNQTT VNDDRQFRNV EPLVMSSRWN PTADQLQALQ EMYRRGVRSP 180 SAQQIQQIAG NLRQFGKIEG KNVFYWFQNH KARERQKKRR EQEASLSRKR KCDVFVNPES 240 EHSVSHWELV EYESSSAMRL GMNDVSRRDM ETKHPRKWPS PSKCTTISED SVSMHRAAVA 300 EYGTDRCIQR ELKQRVEKNE FCLLKDSDQE NSKHFFGLNL SISLPFKNDD MGNEENSTLE 360 LFPALNSIKE DTNFTSMKIT PNKYFEFLPL KN*

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MSSRWNPTAD QLQALQEMYR RGVRSPSAQQ IQQIAGNLRQ FGKIEGKNVF YWFQNHKARE  60
RQKKRREQEA SLSRKRKCDV FVNPESEHSE AMWMVHSSDY SFDRKLRPLM PKSTITASSS  120
TAFSAMPTPC CYCIHHNQTT VNDDRQFRNV EPLVMSSRWN PTADQLQALQ EMYRRGVRSP  180
SAQQIQQIAG NLRQFGKIEG KNVFYWFQNH KARERQKKRR EQEASLSRKR KCDVFVNPES  240
EHSVSHWELV EYESSSAMRL GMNDVSRRDM ETKHPRKWPS PSKCTTISED SVSMHRAAVA  300
EYGTDRCIQR ELKQRVEKNE FCLLKDSDQE NSKHFFGLNL SISLPFKNDD MGNEENSTLE  360
LFPALNSIKE DTNFTSMKIT PNKYFEFLPL KN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	63	77	KKRREQEASLSRKRK
2	217	231	KKRREQEASLSRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-24	WOX family protein