PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018637.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 198aa    MW: 21939.2 Da    PI: 8.6602
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018637.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260115.72.9e-36211201100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  aCaaCk++rrkCa++C lapyfpa+++k+f n++klFG+sn+ k+lk+++++e+e+a++s++++A++ra  Pv G++ vi++l++ ++  kael+ + 
  Oeu018637.1  21 ACAACKYQRRKCAPNCSLAPYFPADKQKDFLNAQKLFGVSNIKKILKNVKQNEKEAATRSIIFQANMRAIHPVGGCCHVIKELESYIQFYKAELDFVL 118
                  7*********************************************************************************************9887 PP

       DUF260  99 ee 100
                  ++
  Oeu018637.1 119 HQ 120
                  76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MNLAPKSANS AAEGSTVSSQ ACAACKYQRR KCAPNCSLAP YFPADKQKDF LNAQKLFGVS  60
NIKKILKNVK QNEKEAATRS IIFQANMRAI HPVGGCCHVI KELESYIQFY KAELDFVLHQ  120
IAICRAQALE NEIQNMGSYQ KLGLDNQEVD GMDIGTMGTW DGQPLLVEKM KDLKPDLGAF  180
KERQVQVQFQ SKVSNYA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.13e-41LBD family protein