PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu018949.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GeBP
Protein Properties Length: 196aa    MW: 22985.8 Da    PI: 9.9986
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu018949.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57352.91e-161771997
       DUF573 19 lidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97
                 +idfk    ++  +++++fy f+k++++ +++k q++eK+rrL+kKf ++ kk +++g   +fs+ h++ +fels+k+Wg
  Oeu018949.1  1 MIDFKC---MHRDKNMTDFYFFIKDKLDTQFTKIQITEKLRRLRKKFVGNFKKtTENGPPGDFSNRHNSIVFELSNKLWG 77
                 667743...344679***********************************999677888889*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MIDFKCMHRD KNMTDFYFFI KDKLDTQFTK IQITEKLRRL RKKFVGNFKK TTENGPPGDF  60
SNRHNSIVFE LSNKLWGNDG CDKKLIIEIS EKTRKRRRVE FGSKKEDKKK KGTVEDEVDI  120
NMELKYPLIH PSFNQNIGFI APDMVKKNCT LKGSCNSGNI EAKWEKLMIK EVELYYKKLD  180
LMKEMIGDVL QSLKD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19498RKRRR
294111RKRRRVEFGSKKEDKKKK
39599KRRRV
495112RKRRRVEFGSKKEDKKKK
596113RKRRRVEFGSKKEDKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-08GeBP family protein