PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu019112.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 352aa MW: 39249.6 Da PI: 7.1419

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu019112.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.5	9.5e-18	187	241	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k Oeu019112.1 187 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 241 778899***********************************************98 PP
2	HD-ZIP_I/II	128.9	2.1e-41	187	277	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+++LEesF+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++d+l+een+rL+ke +eLr +lk Oeu019112.1 187 RKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLTEENRRLHKELQELR-ALK 277 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MELRLSLGDS SKPVEFLTKN SASEQQNPIK KNGFNLCMEL GLNTNGGNQE NKSYEKDGDD 60 DISEDTREDF MENTRIQLDL LPRAPVPRRT PSHLHPLPWS SDNGSSENGS ISGNVGLLAA 120 ARVFEVNRLP AAEEVSSANS VGSPFQRDFG IYANTGNENL GGNDVVETER VLSSRASDDD 180 ENGFNTRKKL RLSKEQSAFL EESFKEHSTL NPKQKLALAK QLNLRPRQVE VWFQNRRART 240 KLKQTEVDCE YLKRCCDTLT EENRRLHKEL QELRALKTSN PFCSQLPATT LTMCPSCERV 300 ATTSAAATNA RTTNIDSTTK PINPFPLSRP RFYPFSQTPP TPNHHHQSAA S*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MELRLSLGDS SKPVEFLTKN SASEQQNPIK KNGFNLCMEL GLNTNGGNQE NKSYEKDGDD  60
DISEDTREDF MENTRIQLDL LPRAPVPRRT PSHLHPLPWS SDNGSSENGS ISGNVGLLAA  120
ARVFEVNRLP AAEEVSSANS VGSPFQRDFG IYANTGNENL GGNDVVETER VLSSRASDDD  180
ENGFNTRKKL RLSKEQSAFL EESFKEHSTL NPKQKLALAK QLNLRPRQVE VWFQNRRART  240
KLKQTEVDCE YLKRCCDTLT EENRRLHKEL QELRALKTSN PFCSQLPATT LTMCPSCERV  300
ATTSAAATNA RTTNIDSTTK PINPFPLSRP RFYPFSQTPP TPNHHHQSAA S*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	192	TRKKLRL
2	236	244	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-65	HD-ZIP family protein