PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu019130.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 108aa    MW: 12350.5 Da    PI: 9.5436
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu019130.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.41.9e-23959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krien+  rq+ ++kR+ gi KK +ELS+LCd++va+i+fs+tg l +++s
  Oeu019130.1  9 KRIENSKFRQIAYAKRKDGIVKKTNELSILCDTDVALIMFSPTGCLTTFPS 59
                 79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MGRKKLAMKR IENSKFRQIA YAKRKDGIVK KTNELSILCD TDVALIMFSP TGCLTTFPSN  60
GRVEDTFLRF VDRPDEQRGG YVFTCMMNKI IVEVVESMVS VYTFFIY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22130.12e-27MIKC_MADS family protein