PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu019139.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 656aa    MW: 72220.4 Da    PI: 5.561
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu019139.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.91.9e-092263256
                 HHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox 32 eLAkklgLterqVkvWFqNrRakek 56
                 +L+++lgL  rq+k+WFqNrR+++k
  Oeu019139.1  2 QLSRELGLAPRQIKFWFQNRRTQRK 26
                 8*********************998 PP
2START164.67.1e-521703942206
                  HHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
        START   2 laeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                  +a  a++el+++ + +ep+W+ks+   e +n + + ++f++ ++       + ea+r+sgvv+m    lv  ++d++ +W e ++    +a tlevis
  Oeu019139.1 170 IASNAMDELIRLLQTNEPLWMKSAdgrEVLNLENYERIFPSPNThrkcpnIRNEASRDSGVVIMSGLVLVDMFMDTS-KWMELFPtivsRAVTLEVIS 266
                  67899*******************99999999999999988888999999999*************99999999999.99999999999********* PP

                  TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS
        START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176
                  sg      g+lqlm  elq+lsplvp R   f+R+++q ++g+w+ivd+S d +++ ++  ss++ a++lpSg+li++++ng+skvtwve+++ ++r 
  Oeu019139.1 267 SGmlgsqtGTLQLMHEELQVLSPLVPtRQICFLRFCQQIEQGSWAIVDISYDLPNQESQfASSCI-ARRLPSGCLIQDMANGYSKVTWVENWEIEDRE 363
                  *********************************************************99655555.79****************************** PP

                  X.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 177 p.hwllrslvksglaegaktwvatlqrqcek 206
                  p h l+r l+++gla+ga +w+++lqr ce+
  Oeu019139.1 364 PiHRLYRDLIHRGLAFGAERWLSALQRICER 394
                  *****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    
MQLSRELGLA PRQIKFWFQN RRTQRKAQYE RADNSALRAE NDKIRCENIT ISVALKNVIC  60
PSCGGPPVSE DPYLDEQRLQ MENVQLKEEL DKASSVAAKY IGRSISQLPP VQPFHVSSLD  120
LSMSSYGGLR IAGPSLDLDL LPGSLTGSLQ KLLFPTLSIS DMDKSLMADI ASNAMDELIR  180
LLQTNEPLWM KSADGREVLN LENYERIFPS PNTHRKCPNI RNEASRDSGV VIMSGLVLVD  240
MFMDTSKWME LFPTIVSRAV TLEVISSGML GSQTGTLQLM HEELQVLSPL VPTRQICFLR  300
FCQQIEQGSW AIVDISYDLP NQESQFASSC IARRLPSGCL IQDMANGYSK VTWVENWEIE  360
DREPIHRLYR DLIHRGLAFG AERWLSALQR ICERFSCLMV TSNSTLIPSP EGKRSMTKLA  420
QRMINNFCAS INPSNGERWM TLSGSNEFEV RAALHKSTDP GQPNAVVLSA ATTIWLPVSA  480
QNIFNFFRDE RTRPQWDVLS NQNPVQEVAH ISNGAHPGNC ISVLQALNAN QNMLILQESC  540
IDSSGSLVVY SPVDLPSINI AMSGADPSSI ALLPSGFTIS PDGRQQDQLQ AGGIDYGAST  600
STGGSSSGSL ITIVFQILVS SLPSAKMKQE SVTTVTNLIS DTARQIKAAL NCIAS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein