PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu019230.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CAMTA

Protein Properties

Length: 965aa MW: 108404 Da PI: 5.6166

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu019230.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	142.2	1.5e-44	15	97	36	118
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gs++L++rk +ryfrkDG++w+kkkdgktvrE+hekLKvg++++l+cyYah+e+n++fqrr+yw+Le++l +iv+vhylevk Oeu019230.1 15 GGSVFLFDRKELRYFRKDGHNWRKKKDGKTVREAHEKLKVGSIDMLHCYYAHGEDNENFQRRSYWMLEQDLMHIVFVHYLEVK 97 69******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 965 aa Download sequence
MSNLSFILPA PFFSGGSVFL FDRKELRYFR KDGHNWRKKK DGKTVREAHE KLKVGSIDML 60 HCYYAHGEDN ENFQRRSYWM LEQDLMHIVF VHYLEVKGNK TNTCYARNNE SSVSNSEDDS 120 SSSSCFRGNY DKIVSANATS SSPISTLTSA YESNESEDIL QVNSRFDSYP ESPLTDDSHT 180 THSSPYDSLP CPGNRNVAAM KYSALGHRYE NFDGGNVICG AQTKLDLESW EDVFGHCTAG 240 ETAYKQESGC SLPVQANWQE NSIEQSNFQM LNSHSDIWNL MKPHVENDMS PVVTENCSFL 300 LKKPLISGLQ TEESLKKVDS FSRWVAKELG EADELRMESS NGISWSIMGA EDYPSVPAQL 360 QEDLDALSPS LSQDQLFSII DFSPNWAYSN LETKVLISGT FLKSEQEIAN CRWSIMFGEL 420 EVPAEVLPDG LLCCHAPRHK PGPVPFYITC SNRLACSEVR EFEYRFGPNQ KIDAEDESEG 480 TSEIQFRQRF EKLMSLNLVC NTHILENDTG KQNLVNRIFS LMERENHQEA KVTSENYISQ 540 PKVAGELFLE KQLKEKFYSW LLHKVTEDGK GPNVFDEGGQ GALHLAAALG YNWALLPIIV 600 SGVSIDFRDA NGWTALHWAA SCGREDTVAS LISLGAAPGV LTDPSSEHPL GRTPADLASA 660 SGHKGISGFL AETSLTTHLT SLTVNDPQDY DTSEVSEVKA IRTVSEHVAI PTTEQDVPDI 720 HSLKDSLAAV RNATQAAARI HQIFRIQSFQ RKQFNEQSFD ELVTPEEHAV SLVAAKTSRV 780 GQNDGTNNAA ALHIQKKFRG WKKRKEFLLI RQKIVKIQAH VRGHQVRKKY KPIVWSVGIL 840 EKVILRWRRK GAGLRGFQRD GVLKGPSTQG SLQQEDDYDF LKEGRKQTEE RLQKALARVK 900 SMTRYPEARA QYRRLLTAAE GLRETKDASS TNENNLDDTI FPDDELIDVE ALLDDDTFMS 960 MTFQ*

Sequence ? help Back to Top

Protein Sequence Length: 965 aa Download sequence

MSNLSFILPA PFFSGGSVFL FDRKELRYFR KDGHNWRKKK DGKTVREAHE KLKVGSIDML  60
HCYYAHGEDN ENFQRRSYWM LEQDLMHIVF VHYLEVKGNK TNTCYARNNE SSVSNSEDDS  120
SSSSCFRGNY DKIVSANATS SSPISTLTSA YESNESEDIL QVNSRFDSYP ESPLTDDSHT  180
THSSPYDSLP CPGNRNVAAM KYSALGHRYE NFDGGNVICG AQTKLDLESW EDVFGHCTAG  240
ETAYKQESGC SLPVQANWQE NSIEQSNFQM LNSHSDIWNL MKPHVENDMS PVVTENCSFL  300
LKKPLISGLQ TEESLKKVDS FSRWVAKELG EADELRMESS NGISWSIMGA EDYPSVPAQL  360
QEDLDALSPS LSQDQLFSII DFSPNWAYSN LETKVLISGT FLKSEQEIAN CRWSIMFGEL  420
EVPAEVLPDG LLCCHAPRHK PGPVPFYITC SNRLACSEVR EFEYRFGPNQ KIDAEDESEG  480
TSEIQFRQRF EKLMSLNLVC NTHILENDTG KQNLVNRIFS LMERENHQEA KVTSENYISQ  540
PKVAGELFLE KQLKEKFYSW LLHKVTEDGK GPNVFDEGGQ GALHLAAALG YNWALLPIIV  600
SGVSIDFRDA NGWTALHWAA SCGREDTVAS LISLGAAPGV LTDPSSEHPL GRTPADLASA  660
SGHKGISGFL AETSLTTHLT SLTVNDPQDY DTSEVSEVKA IRTVSEHVAI PTTEQDVPDI  720
HSLKDSLAAV RNATQAAARI HQIFRIQSFQ RKQFNEQSFD ELVTPEEHAV SLVAAKTSRV  780
GQNDGTNNAA ALHIQKKFRG WKKRKEFLLI RQKIVKIQAH VRGHQVRKKY KPIVWSVGIL  840
EKVILRWRRK GAGLRGFQRD GVLKGPSTQG SLQQEDDYDF LKEGRKQTEE RLQKALARVK  900
SMTRYPEARA QYRRLLTAAE GLRETKDASS TNENNLDDTI FPDDELIDVE ALLDDDTFMS  960
MTFQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	802	831	KKRKEFLLIRQKIVKIQAHVRGHQVRKKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	0.0	CAMTA family protein