PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu019560.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 203aa    MW: 22932.4 Da    PI: 8.1815
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu019560.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.6e-132366755
                 HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                   Er+RR+r+N+++  Lr ++P+ +      K++Ka+i + A++YI++Lq
  Oeu019560.1 23 VSERNRRKRLNERLYALRAVVPNiS------KMDKASIIKDAIDYIQELQ 66
                 57*********************66......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MLPYYDLSSP DGTLSSVASK NIVSERNRRK RLNERLYALR AVVPNISKMD KASIIKDAID  60
YIQELQEEEK RIRAEVLELE SGRSSSGTTI VDFDQEATTF YSRPKRSRID QCYDSTGSRS  120
CPIEVLELRV SNMGEKIVVV SLTCWKRTDT MVKLCEIFES LKLKIITANI TAFSERLLKT  180
AFIEVIFCFS LSTFAISTPS MS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.22e-59bHLH family protein