PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu019608.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 544aa    MW: 60721.6 Da    PI: 5.7699
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu019608.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS440.99.1e-1351745432374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                  +e +++cA+avs++dl   ++l+++l+ ++s  g+p+qRlaay++e+L arl++s+s++yk+l+++e +   s+e l+ +++++e++P++kf++l aN
  Oeu019608.1 174 KEIMVACAKAVSDNDLLTYEWLMSELRLMVSVCGEPLQRLAAYMLEGLVARLSSSGSSIYKSLRCKEPT---SDELLSHMHFLYEICPYFKFGYLSAN 268
                  67899***************************************************************9...89999999****************** PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                   aI +a++ e+r+HiiDf+i qG+QW++L++aLas+p+gpp++RiTg+++++s   +   le +g+rL+ +A++++vpfef++ v  +   ++ e+L+
  Oeu019608.1 269 GAIADAMKDENRIHIIDFQIAQGIQWITLIHALASQPGGPPHIRITGIDDSTSAyaRGGGLEIVGQRLSIIAKSCKVPFEFHA-VPVSACIVQSEHLK 365
                  **************************************************998899999************************.688999******** PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  v+pgEalaVn++l+lh+++desv++e++rd++L++vkslsPkvv+++eqe+++n+++F+ rf e+l+yy a+f+sl++ lpr+++eri+vE+++l+r+
  Oeu019608.1 366 VQPGEALAVNFALMLHHMPDESVTTENHRDRLLRMVKSLSPKVVTLIEQESNTNTAPFFLRFRETLDYYLAIFESLDVALPRDQKERINVEQFCLARD 463
                  ************************************************************************************************** PP

         GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ivn++aceg +r+erhe l+kWr+r+++aGF+p+pls+++++++k+ll+++ ++ yr+ee++g+l+lgWk++ +v+ +aW+
  Oeu019608.1 464 IVNIIACEGPDRVERHELLGKWRSRFSMAGFTPYPLSSFINATIKTLLENYCEN-YRLEERDGALYLGWKNKDIVASCAWQ 543
                  ***************************************************955.*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    
MQTSQNHGSL DGAARFYHQP PDELESYLLA PSDNLDHCTS YEGGSHSTQF SVLTPEQHST  60
IESSTGSGCC PSYNSPSTVS FSSNGSPICQ RDHLSDMNHS GYVHCYSDSS RSRSVDNDNE  120
LEHKLRELEN VMLGPESQIF NAQNITISGA LNQNSLKAQS SKQAVEMIQT RNLKEIMVAC  180
AKAVSDNDLL TYEWLMSELR LMVSVCGEPL QRLAAYMLEG LVARLSSSGS SIYKSLRCKE  240
PTSDELLSHM HFLYEICPYF KFGYLSANGA IADAMKDENR IHIIDFQIAQ GIQWITLIHA  300
LASQPGGPPH IRITGIDDST SAYARGGGLE IVGQRLSIIA KSCKVPFEFH AVPVSACIVQ  360
SEHLKVQPGE ALAVNFALML HHMPDESVTT ENHRDRLLRM VKSLSPKVVT LIEQESNTNT  420
APFFLRFRET LDYYLAIFES LDVALPRDQK ERINVEQFCL ARDIVNIIAC EGPDRVERHE  480
LLGKWRSRFS MAGFTPYPLS SFINATIKTL LENYCENYRL EERDGALYLG WKNKDIVASC  540
AWQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein