PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu019971.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 344aa    MW: 38926.8 Da    PI: 6.3998
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu019971.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS263.66.9e-81233831374
         GRAS  31 aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpa 127
                  +s +g++++Rla+yf eAL +++ r   e+ k    + ++++++s++l+ +++ f+++ P+ +++ ++  qaI+e v++++++HiiD++i++G++   
  Oeu019971.1   2 SSRTGNAVERLAFYFIEALYEKIDR---ETGKFTGKKLADPQEVSKSLKTTQIaFHNLLPLSQITKFAGTQAIVEQVAESRKIHIIDLQIKNGIHCTI 96 
                  7999*********************...66666677777777889999999988******************************************** PP

         GRAS 128 LlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleser 224
                  L+qaLasR++ p   l+ T+v+    +s+ ++ etg+ L++fA++l+++f fnv++++++  l+ + ++++++E++aV   + l +   ++ +l+   
  Oeu019971.1  97 LMQALASRDKHPVdYLKFTTVAT---NSRSMIDETGRHLTSFAQSLNLKFTFNVVMVDDILHLNEKLFDLDKDETIAVYAEYVLTNWIPRPDCLD--- 188
                  *********766559*******9...5799****************************************************9999995555555... PP

         GRAS 225 devLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleea 322
                   +++ l+++l+P v++v+e ea++ns+ F+erf++al +y a+fd+++  l +++e+r+  E  ++g +i+nvva+eg+er+ rh +   Wr+ ++++
  Oeu019971.1 189 -NLMILIRTLNPCVMIVSEVEANCNSPFFVERFVDALFFYGAFFDAMADCLKNDEENRRAAESTCFGSAIRNVVAAEGDERKIRHVSIDVWRAYFGRF 285
                  .5************************************************************************************************ PP

         GRAS 323 GFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  G+ +v+ls +   qa+l+l+++  +d  + + +++sl++gWk+ pL s+SaW+
  Oeu019971.1 286 GLIEVELSMSSLYQANLVLKNFVcGDSCSFDMNNKSLIIGWKGTPLSSLSAWK 338
                  ***********************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MSSRTGNAVE RLAFYFIEAL YEKIDRETGK FTGKKLADPQ EVSKSLKTTQ IAFHNLLPLS  60
QITKFAGTQA IVEQVAESRK IHIIDLQIKN GIHCTILMQA LASRDKHPVD YLKFTTVATN  120
SRSMIDETGR HLTSFAQSLN LKFTFNVVMV DDILHLNEKL FDLDKDETIA VYAEYVLTNW  180
IPRPDCLDNL MILIRTLNPC VMIVSEVEAN CNSPFFVERF VDALFFYGAF FDAMADCLKN  240
DEENRRAAES TCFGSAIRNV VAAEGDERKI RHVSIDVWRA YFGRFGLIEV ELSMSSLYQA  300
NLVLKNFVCG DSCSFDMNNK SLIIGWKGTP LSSLSAWKFE KRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-49GRAS family protein