PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020087.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 190aa MW: 21715.3 Da PI: 10.8456

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020087.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.1	4.8e-14	17	62	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v+++G+++W++I ++ + Rt+k+c++rw + Oeu020087.1 17 KGPWKAEEDEVLINHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 62 79***********************8887799********87 PP
2	Myb_DNA-binding	46.8	6.8e-15	73	112	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w Oeu020087.1 73 KFSAEEERTVIDLQAQFGNK-WAKIATYLP-GRTDNDVKNFW 112 79****************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MDGRKRMLCD DMGAIKKGPW KAEEDEVLIN HVNKYGPRDW SSIRSKGLLQ RTGKSCRLRW 60 VNKLRPNLKN GVKFSAEEER TVIDLQAQFG NKWAKIATYL PGRTDNDVKN FWSSRQKRLA 120 RILQTSAPPC GSKPRKNKEI QVPPLLDGVP SLEVIKISFI LTNLWLIPFL AFQDRSVGHP 180 IFPFSHHKL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-71	MYB family protein