PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu020103.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 214aa    MW: 24750 Da    PI: 6.6342
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu020103.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.54.1e-29959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 krien+snrqvt+skRr gi+KKA+E+SvLCda+v+viif ++gk+++++s
  Oeu020103.1  9 KRIENSSNRQVTYSKRRSGIMKKAKEISVLCDAQVSVIIFNNSGKMHDFCS 59
                 79***********************************************96 PP
2K-box71.91.9e-2471167197
        K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                  y+k sgk+l++ak+e+l++e++++kke++ +q+e+Rhl Ged+++ ++keL+ Le++Le+++++ ++k+ + l+ +     + e+e+q  + +Lr++
  Oeu020103.1  71 YHKLSGKKLWDAKHEHLDNEINRIKKENDRMQTELRHLSGEDITTSNYKELMVLEEALENGISSLKAKQAKSLYISYFFNEMLEDENQGLQFKLRQM 167
                  7899******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRRSGIMK KAKEISVLCD AQVSVIIFNN SGKMHDFCSP  60
STTLIDLLDQ YHKLSGKKLW DAKHEHLDNE INRIKKENDR MQTELRHLSG EDITTSNYKE  120
LMVLEEALEN GISSLKAKQA KSLYISYFFN EMLEDENQGL QFKLRQMHLD PMDDQNGLEN  180
GDVYHQQGVG DYESQMPFAF RVQPMQPNLQ DRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.17e-75MIKC_MADS family protein