PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu020322.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 234aa    MW: 26982.5 Da    PI: 5.984
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu020322.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.29.3e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd +l + +   G  +W+++++  g++R++k+c++rw +yl
      Oeu020322.1 14 RGPWTIEEDHKLMNFILNNGIQCWRLVPKLAGLRRCGKSCRLRWINYL 61
                     89********************************************97 PP
2Myb_DNA-binding50.74.1e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T+ E++ +++++ +lG++ W++Ia++++ gRt++++k++w++
      Oeu020322.1  67 RGALTEAEEDMIIELHSRLGNR-WSKIASHFP-GRTDNEIKNYWNT 110
                      7889******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGRQPCCEKE GLKRGPWTIE EDHKLMNFIL NNGIQCWRLV PKLAGLRRCG KSCRLRWINY  60
LRPDLKRGAL TEAEEDMIIE LHSRLGNRWS KIASHFPGRT DNEIKNYWNT RIKKKLRLLG  120
LDPVTHKPVD ETENSAAENE EIYQHIISKE KETDYQTEGA AKSGFNEMKN ISIFDVPKEN  180
SEMGSILSKT TDESSVNFSA IIDGHDQFED PFQNWIASPL QWDVFSNLEE NFP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111117RIKKKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14340.12e-82MYB family protein