PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020373.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 131aa MW: 14927.2 Da PI: 8.3603

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020373.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	120.2	1.2e-37	10	106	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 aCaaCk++rr+C++dC lapyfpa+qpk f+n+hklFG++n lk+lk+l++++r +am+s+ y+A++r r PvyG+++ i+ l q++ ++el ++ Oeu020373.1 10 ACAACKYQRRRCTSDCSLAPYFPADQPKVFQNAHKLFGVKNTLKILKQLDPTQRVIAMKSIKYQANMRDRFPVYGCLAEIQLLYCQIQAGEEELLAV 106 7***************************************************************************************999998766 PP

Sequence ? help Back to Top
Protein Sequence Length: 131 aa Download sequence
MNLKSGTEEA CAACKYQRRR CTSDCSLAPY FPADQPKVFQ NAHKLFGVKN TLKILKQLDP 60 TQRVIAMKSI KYQANMRDRF PVYGCLAEIQ LLYCQIQAGE EELLAVLAQL AFYRQNHQEQ 120 QEISSTNETF *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	1e-40	LBD family protein