PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu020500.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family FAR1
Protein Properties Length: 246aa    MW: 27934.3 Da    PI: 6.2606
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu020500.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.93e-2265151291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                   Y++Y++ +GFsvr+ k+++   ++++ ++ ++Cskeg ++++ ++      +++e+rtgCka++    +++g+w+vt++++eHnHe+ap
  Oeu020500.1  65 LYCDYGQAMGFSVRRGKQYYFMGTKRVRSKCYCCSKEGIKDDKVDA---LTYKKPESRTGCKAMICFACDDNGQWKVTRFVKEHNHEMAP 151
                  69***************************************99877...788999********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MESSELELKS HEANCTDSDE EGAVIPRSVG EVVDENEGSN EVLVEGLEKK LLEQVVYSEE  60
EAYMLYCDYG QAMGFSVRRG KQYYFMGTKR VRSKCYCCSK EGIKDDKVDA LTYKKPESRT  120
GCKAMICFAC DDNGQWKVTR FVKEHNHEMA PAYAKPSLRS GQAILTATIY GNGGNERDKI  180
RELSLQLSIA KNQAATFEKQ AATYKRQLDM VFQHIEEHNQ SLSKRIQHTV RNVSDLESEE  240
RRSQR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-36FAR1 family protein